JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	SAS	tseq	genename	chr	start	end
TMEM255B_chr13_113754226_113821995	0/0	t0051	6823	1	0	1	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0052	6501	1	0	0	0	1	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0053	6118	1	0	1	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0054	6501	1	1	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0055	6349	1	0	0	1	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0056	6722	1	0	1	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0057	6646	1	0	1	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0058	6501	1	0	1	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0059	6498	1	0	0	1	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0060	6591	1	0	0	0	1	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0061	5719	1	1	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0062	5460	1	1	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0063	6501	1	0	0	0	1	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0064	5343	1	1	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0065	5344	1	1	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0066	6422	1	0	0	1	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0067	5137	1	0	0	1	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0068	5596	1	0	0	1	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0069	5578	1	1	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0070	5577	1	1	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0071	5137	1	0	0	1	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0072	5596	1	0	1	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0073	5367	1	0	1	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0074	5137	1	1	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0075	5137	1	0	1	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0076	5137	1	0	0	0	1	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0077	5596	1	0	0	1	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0078	5335	1	1	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0079	5308	1	1	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0080	5137	1	0	0	1	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0081	5137	1	0	0	1	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0082	5248	1	0	0	0	1	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0083	5138	1	0	0	1	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0084	5596	1	0	1	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0085	5137	1	0	0	0	1	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0086	5137	1	0	0	1	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0087	5137	1	0	0	1	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0088	5137	1	0	0	0	1	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0089	5597	1	0	0	0	1	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0090	5520	1	0	0	1	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0091	5596	1	0	0	1	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0092	5596	1	0	0	0	1	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0093	5596	1	0	1	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0094	5596	1	0	1	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0095	5137	1	0	1	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0096	5596	1	0	1	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0097	6052	1	1	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0098	4955	1	0	1	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0099	5596	1	1	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0100	5137	1	0	0	0	1	copy fasta	TMEM255B	chr13	113754226	113821995