JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Catalog

Haplotypefield

Choose the ACTG layer used to define haplotypes.

Genename

e.g. ALDH2, HBB.

Chr

Chromosome number (1-22, X, Y).

GRCh38

1 = haplotype type matches GRCh38; 0 = does not match.

Chm13v2

1 = haplotype type matches CHM13v2; 0 = does not match.

Gpopname

Filter by superpopulation group.

Popname

Filter by population group.

Total

Minimum number of hits (≥).

Start

Start coordinate (GRCh38).

End

End coordinate (GRCh38).

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regionname	grch38/ chm13v2 1/0: The haplotype type is the same as GRCh38 0/1: The haplotype type is the same as CHM13v2 0/0: The haplotype type matches neither GRCh38 nor CHM13v2 1/1: The haplotype type is the same on both GRCh38 and CHM13v2	thapid	tlen	total	AFR	AMR	EAS	EUR	SAS	tseq	genename	chr	start	end
TMEM255B_chr13_113754226_113821995	0/0	t0101	5137	1	0	0	0	0	1	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0102	5266	1	0	1	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0103	5686	1	0	0	1	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0104	5596	1	0	0	0	0	1	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0105	5596	1	0	0	0	0	1	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0106	5596	1	0	1	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0107	5672	1	0	0	0	0	1	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0108	5596	1	0	0	0	0	1	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0109	5137	1	0	1	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0110	5061	1	0	0	1	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0111	5120	1	0	1	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0112	5119	1	0	1	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0113	5137	1	0	0	1	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0114	5595	1	0	0	1	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0115	5596	1	0	0	1	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0116	5672	1	0	1	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0117	5137	1	0	0	1	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0118	5268	1	1	0	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0119	5172	1	1	0	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0120	5600	1	1	0	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0121	5744	1	1	0	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0122	5340	1	1	0	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0123	5341	1	1	0	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0124	5600	1	1	0	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0125	5340	1	1	0	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0126	5340	1	1	0	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0127	5211	1	1	0	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0128	5211	1	1	0	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0129	5230	1	1	0	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0130	5596	1	0	0	1	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0131	5596	1	0	0	0	0	1	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0132	5604	1	1	0	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0133	5601	1	1	0	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0134	5583	1	1	0	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0135	5554	1	1	0	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0136	5582	1	1	0	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0137	5578	1	1	0	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0138	5582	1	0	1	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0139	5349	1	0	0	0	1	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0140	5828	1	1	0	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0141	5828	1	1	0	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0142	5367	1	1	0	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0143	5137	1	0	1	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0144	5367	1	0	1	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/1	t0145	5367	1	0	0	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0146	5647	1	1	0	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0147	5702	1	0	0	1	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0148	5101	1	0	1	0	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0149	5137	1	0	0	1	0	0	copy fasta	TMEM255B	chr13	113754226	113821995
TMEM255B_chr13_113754226_113821995	0/0	t0150	5137	1	0	0	1	0	0	copy fasta	TMEM255B	chr13	113754226	113821995