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deepTMHMM Topology Viewer — ABCA13 ABCA13_chr7_48166458_48652497

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolABCA13
Gene NameATP binding cassette subfamily A member 13
NCBI Gene IDGeneID:154664
EnsemblENSG00000179869.15
HGNCHGNC:14638
RefSeq ProteinNP_689914.3
Protein Length (ref)5058 aa
Haplotypes88
TM Helices (ref)12
Distinct Topologies5
Ref (a0001) TopologyTMhelix(23-43)->TMhelix(3568-3588)->TMhelix(3614-3636)->TMhelix(3648-3668)->TMhelix(3678-3698)->TMhelix(3754-3772)->TMhelix(4227-4246)->TMhelix(4457-4474)->TMhelix(4504-4525)->TMhelix(4536-4557)->TMhelix(4568-4588)->TMhelix(4655-4671)
Genomic Regionchr7: 48166458-48652497
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼