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deepTMHMM Topology Viewer — ABCA4 ABCA4_chr1_93987834_94126148

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolABCA4
Gene NameATP binding cassette subfamily A member 4
NCBI Gene IDGeneID:24
EnsemblENSG00000198691.14
HGNCHGNC:34
RefSeq ProteinNP_000341.2
Protein Length (ref)2273 aa
Haplotypes51
TM Helices (ref)12
Distinct Topologies1
Ref (a0001) TopologyTMhelix(22-42)->TMhelix(647-667)->TMhelix(700-720)->TMhelix(731-751)->TMhelix(760-780)->TMhelix(836-856)->TMhelix(1377-1397)->TMhelix(1728-1748)->TMhelix(1760-1780)->TMhelix(1793-1813)->TMhelix(1832-1852)->TMhelix(1874-1894)
Genomic Regionchr1: 93987834-94126148
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼