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deepTMHMM Topology Viewer — ABCA8 ABCA8_chr17_68862289_68960392

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolABCA8
Gene NameATP binding cassette subfamily A member 8
NCBI Gene IDGeneID:10351
EnsemblENSG00000141338.15
HGNCHGNC:38
RefSeq ProteinNP_001275914.1
Protein Length (ref)1621 aa
Haplotypes32
TM Helices (ref)14
Distinct Topologies5
Ref (a0001) TopologyTMhelix(30-48)->TMhelix(223-238)->TMhelix(267-296)->TMhelix(300-320)->TMhelix(329-349)->TMhelix(398-418)->TMhelix(862-882)->TMhelix(1024-1033)->TMhelix(1070-1090)->TMhelix(1100-1123)->TMhelix(1136-1154)->TMhelix(1161-1170)->TMhelix(1172-1181)->TMhelix(1199-1217)
Genomic Regionchr17: 68862289-68960392
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼