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deepTMHMM Topology Viewer — ABCA9 ABCA9_chr17_68969488_69065927

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolABCA9
Gene NameATP binding cassette subfamily A member 9
NCBI Gene IDGeneID:10350
EnsemblENSG00000154258.17
HGNCHGNC:39
RefSeq ProteinNP_525022.2
Protein Length (ref)1624 aa
Haplotypes23
TM Helices (ref)12
Distinct Topologies4
Ref (a0001) TopologyTMhelix(30-48)->TMhelix(221-239)->TMhelix(268-295)->TMhelix(301-321)->TMhelix(330-350)->TMhelix(399-419)->TMhelix(864-884)->TMhelix(1027-1036)->TMhelix(1071-1092)->TMhelix(1105-1125)->TMhelix(1138-1153)->TMhelix(1201-1220)
Genomic Regionchr17: 68969488-69065927
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼