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deepTMHMM Topology Viewer — ATP2A1 ATP2A1_chr16_28873488_28909466

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolATP2A1
Gene NameATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1
NCBI Gene IDGeneID:487
EnsemblENSG00000196296.14
HGNCHGNC:811
RefSeq ProteinNP_004311.1
Protein Length (ref)994 aa
Haplotypes10
TM Helices (ref)10
Distinct Topologies3
Ref (a0001) TopologyTMhelix(57-77)->TMhelix(91-107)->TMhelix(256-273)->TMhelix(295-313)->TMhelix(761-781)->TMhelix(789-809)->TMhelix(837-857)->TMhelix(897-916)->TMhelix(931-949)->TMhelix(968-988)
Genomic Regionchr16: 28873488-28909466
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼