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deepTMHMM Topology Viewer — ATP2A2 ATP2A2_chr12_110276247_110356093

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolATP2A2
Gene NameATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2
NCBI Gene IDGeneID:488
EnsemblENSG00000174437.18
HGNCHGNC:812
RefSeq ProteinNP_733765.1
Protein Length (ref)1042 aa
Haplotypes3
TM Helices (ref)11
Distinct Topologies1
Ref (a0001) TopologyTMhelix(60-76)->TMhelix(88-108)->TMhelix(256-276)->TMhelix(296-314)->TMhelix(762-782)->TMhelix(787-807)->TMhelix(836-856)->TMhelix(895-915)->TMhelix(930-949)->TMhelix(966-986)->TMhelix(1018-1030)
Genomic Regionchr12: 110276247-110356093
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼