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deepTMHMM Topology Viewer — ATP2C1 ATP2C1_chr3_130889084_131008150

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolATP2C1
Gene NameATPase secretory pathway Ca2+ transporting 1
NCBI Gene IDGeneID:27032
EnsemblENSG00000017260.20
HGNCHGNC:13211
RefSeq ProteinNP_001365616.1
Protein Length (ref)919 aa
Haplotypes5
TM Helices (ref)10
Distinct Topologies1
Ref (a0001) TopologyTMhelix(83-93)->TMhelix(102-122)->TMhelix(265-283)->TMhelix(294-314)->TMhelix(703-723)->TMhelix(731-751)->TMhelix(779-795)->TMhelix(810-826)->TMhelix(843-860)->TMhelix(878-898)
Genomic Regionchr3: 130889084-131008150
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼