deepTMHMM Topology Viewer

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼

Gene SymbolCACNA1A

Gene Namecalcium voltage-gated channel subunit alpha1 A

NCBI Gene IDGeneID:773

EnsemblENSG00000141837.22

HGNCHGNC:1388

RefSeq ProteinNP_001120694.1

Protein Length (ref)2511 aa

Haplotypes45

TM Helices (ref)24

Distinct Topologies2

Ref (a0001) TopologyTMhelix(102-118)->TMhelix(139-159)->TMhelix(169-178)->TMhelix(180-189)->TMhelix(226-244)->TMhelix(338-358)->TMhelix(488-506)->TMhelix(517-537)->TMhelix(553-570)->TMhelix(575-584)->TMhelix(613-632)->TMhelix(687-711)->TMhelix(1244-1262)->TMhelix(1278-1302)->TMhelix(1311-1330)->TMhelix(1338-1347)->TMhelix(1375-1395)->TMhelix(1488-1508)->TMhelix(1567-1584)->TMhelix(1599-1619)->TMhelix(1631-1649)->TMhelix(1653-1662)->TMhelix(1693-1710)->TMhelix(1788-1809)

Genomic Regionchr19: 13201442-13511479

deepTMHMM Topology Viewer — CACNA1A CACNA1A_chr19_13201442_13511479