deepTMHMM Topology Viewer

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼

Gene SymbolCACNA1C

Gene Namecalcium voltage-gated channel subunit alpha1 C

NCBI Gene IDGeneID:775

EnsemblENSG00000151067.23

HGNCHGNC:1390

RefSeq ProteinNP_000710.5

Protein Length (ref)2138 aa

Haplotypes6

TM Helices (ref)24

Distinct Topologies1

Ref (a0001) TopologyTMhelix(125-145)->TMhelix(164-179)->TMhelix(197-212)->TMhelix(230-239)->TMhelix(268-287)->TMhelix(383-403)->TMhelix(525-545)->TMhelix(562-578)->TMhelix(591-606)->TMhelix(610-619)->TMhelix(651-670)->TMhelix(728-749)->TMhelix(902-919)->TMhelix(932-952)->TMhelix(969-979)->TMhelix(981-994)->TMhelix(1029-1049)->TMhelix(1144-1164)->TMhelix(1223-1238)->TMhelix(1249-1273)->TMhelix(1285-1300)->TMhelix(1323-1334)->TMhelix(1357-1379)->TMhelix(1451-1475)

Genomic Regionchr12: 2047987-2702950

deepTMHMM Topology Viewer — CACNA1C CACNA1C_chr12_2047987_2702950