deepTMHMM Topology Viewer

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼

Gene SymbolCACNA1D

Gene Namecalcium voltage-gated channel subunit alpha1 D

NCBI Gene IDGeneID:776

EnsemblENSG00000157388.20

HGNCHGNC:1391

RefSeq ProteinNP_001122312.1

Protein Length (ref)2181 aa

Haplotypes5

TM Helices (ref)24

Distinct Topologies2

Ref (a0001) TopologyTMhelix(127-147)->TMhelix(166-181)->TMhelix(199-214)->TMhelix(236-245)->TMhelix(271-290)->TMhelix(386-404)->TMhelix(544-564)->TMhelix(577-597)->TMhelix(610-625)->TMhelix(629-638)->TMhelix(670-689)->TMhelix(746-768)->TMhelix(907-925)->TMhelix(945-965)->TMhelix(977-992)->TMhelix(994-1003)->TMhelix(1035-1055)->TMhelix(1150-1170)->TMhelix(1229-1245)->TMhelix(1259-1279)->TMhelix(1295-1306)->TMhelix(1333-1342)->TMhelix(1367-1389)->TMhelix(1459-1483)

Genomic Regionchr3: 53489611-53818733

deepTMHMM Topology Viewer — CACNA1D CACNA1D_chr3_53489611_53818733