deepTMHMM Topology Viewer

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼

Gene SymbolCACNA1E

Gene Namecalcium voltage-gated channel subunit alpha1 E

NCBI Gene IDGeneID:777

EnsemblENSG00000198216.14

HGNCHGNC:1392

RefSeq ProteinNP_001192222.1

Protein Length (ref)2313 aa

Haplotypes12

TM Helices (ref)24

Distinct Topologies1

Ref (a0001) TopologyTMhelix(91-109)->TMhelix(130-150)->TMhelix(159-169)->TMhelix(171-180)->TMhelix(218-238)->TMhelix(329-349)->TMhelix(477-497)->TMhelix(507-527)->TMhelix(543-560)->TMhelix(565-574)->TMhelix(603-622)->TMhelix(681-701)->TMhelix(1154-1172)->TMhelix(1185-1195)->TMhelix(1197-1206)->TMhelix(1221-1240)->TMhelix(1288-1308)->TMhelix(1401-1421)->TMhelix(1480-1497)->TMhelix(1512-1532)->TMhelix(1547-1559)->TMhelix(1569-1578)->TMhelix(1607-1626)->TMhelix(1701-1722)

Genomic Regionchr1: 181478517-181813084

deepTMHMM Topology Viewer — CACNA1E CACNA1E_chr1_181478517_181813084