deepTMHMM Topology Viewer

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼

Gene SymbolCACNA1S

Gene Namecalcium voltage-gated channel subunit alpha1 S

NCBI Gene IDGeneID:779

EnsemblENSG00000081248.12

HGNCHGNC:1397

RefSeq ProteinNP_000060.2

Protein Length (ref)1873 aa

Haplotypes36

TM Helices (ref)24

Distinct Topologies5

Ref (a0001) TopologyTMhelix(52-72)->TMhelix(91-106)->TMhelix(121-140)->TMhelix(161-170)->TMhelix(196-215)->TMhelix(314-332)->TMhelix(433-452)->TMhelix(466-486)->TMhelix(502-514)->TMhelix(518-527)->TMhelix(559-578)->TMhelix(635-659)->TMhelix(801-818)->TMhelix(831-851)->TMhelix(868-883)->TMhelix(885-895)->TMhelix(921-945)->TMhelix(1043-1065)->TMhelix(1123-1138)->TMhelix(1152-1172)->TMhelix(1187-1200)->TMhelix(1258-1267)->TMhelix(1269-1286)->TMhelix(1360-1380)

Genomic Regionchr1: 201034512-201117426

deepTMHMM Topology Viewer — CACNA1S CACNA1S_chr1_201034512_201117426