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deepTMHMM Topology Viewer — CASD1 CASD1_chr7_94504809_94562019

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolCASD1
Gene NameCAS1 domain containing 1
NCBI Gene IDGeneID:64921
EnsemblENSG00000127995.17
HGNCHGNC:16014
RefSeq ProteinNP_075051.4
Protein Length (ref)797 aa
Haplotypes5
TM Helices (ref)15
Distinct Topologies1
Ref (a0001) TopologyTMhelix(24-39)->TMhelix(314-333)->TMhelix(364-384)->TMhelix(402-417)->TMhelix(434-449)->TMhelix(460-480)->TMhelix(490-507)->TMhelix(516-534)->TMhelix(551-571)->TMhelix(605-620)->TMhelix(639-659)->TMhelix(674-685)->TMhelix(703-720)->TMhelix(735-756)->TMhelix(775-790)
Genomic Regionchr7: 94504809-94562019
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼