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deepTMHMM Topology Viewer — CHRNA1 CHRNA1_chr2_174742592_174769472

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolCHRNA1
Gene Namecholinergic receptor nicotinic alpha 1 subunit
NCBI Gene IDGeneID:1134
EnsemblENSG00000138435.16
HGNCHGNC:1955
RefSeq ProteinNP_000070.1
Protein Length (ref)457 aa
Haplotypes10
TM Helices (ref)4
Distinct Topologies1
Ref (a0001) Topologysignal(1-20)->TMhelix(231-256)->TMhelix(263-281)->TMhelix(298-318)->TMhelix(429-451)
Genomic Regionchr2: 174742592-174769472
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼