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deepTMHMM Topology Viewer — CHRNA5 CHRNA5_chr15_78560520_78600269

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolCHRNA5
Gene Namecholinergic receptor nicotinic alpha 5 subunit
NCBI Gene IDGeneID:1138
EnsemblENSG00000169684.13
HGNCHGNC:1959
RefSeq ProteinNP_000736.2
Protein Length (ref)468 aa
Haplotypes8
TM Helices (ref)4
Distinct Topologies1
Ref (a0001) Topologysignal(1-27)->TMhelix(251-275)->TMhelix(282-299)->TMhelix(316-337)->TMhelix(430-451)
Genomic Regionchr15: 78560520-78600269
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼