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deepTMHMM Topology Viewer — CLN3 CLN3_chr16_28472279_28497074

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolCLN3
Gene NameCLN3 lysosomal/endosomal transmembrane protein, battenin
NCBI Gene IDGeneID:1201
EnsemblENSG00000188603.22
HGNCHGNC:2074
RefSeq ProteinNP_001035897.1
Protein Length (ref)438 aa
Haplotypes5
TM Helices (ref)11
Distinct Topologies1
Ref (a0001) TopologyTMhelix(39-54)->TMhelix(99-119)->TMhelix(128-144)->TMhelix(152-172)->TMhelix(183-202)->TMhelix(213-231)->TMhelix(285-298)->TMhelix(321-337)->TMhelix(346-365)->TMhelix(372-390)->TMhelix(410-430)
Genomic Regionchr16: 28472279-28497074
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼