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deepTMHMM Topology Viewer — LGR5 LGR5_chr12_71434798_71591310

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolLGR5
Gene Nameleucine rich repeat containing G protein-coupled receptor 5
NCBI Gene IDGeneID:8549
EnsemblENSG00000139292.13
HGNCHGNC:4504
RefSeq ProteinNP_003658.1
Protein Length (ref)907 aa
Haplotypes13
TM Helices (ref)7
Distinct Topologies1
Ref (a0001) Topologysignal(1-21)->TMhelix(562-583)->TMhelix(594-616)->TMhelix(639-660)->TMhelix(681-701)->TMhelix(725-745)->TMhelix(768-791)->TMhelix(800-823)
Genomic Regionchr12: 71434798-71591310
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼