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deepTMHMM Topology Viewer — NPC1L1 NPC1L1_chr7_44507535_44546330

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolNPC1L1
Gene NameNPC1 like intracellular cholesterol transporter 1
NCBI Gene IDGeneID:29881
EnsemblENSG00000015520.15
HGNCHGNC:7898
RefSeq ProteinNP_001095118.1
Protein Length (ref)1332 aa
Haplotypes21
TM Helices (ref)13
Distinct Topologies3
Ref (a0001) Topologysignal(1-21)->TMhelix(286-307)->TMhelix(352-372)->TMhelix(633-651)->TMhelix(664-690)->TMhelix(698-719)->TMhelix(743-763)->TMhelix(771-795)->TMhelix(844-864)->TMhelix(1112-1131)->TMhelix(1139-1156)->TMhelix(1167-1187)->TMhelix(1208-1229)->TMhelix(1239-1264)
Genomic Regionchr7: 44507535-44546330
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼