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deepTMHMM Topology Viewer — OTOP1 OTOP1_chr4_4183726_4231929

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolOTOP1
Gene Nameotopetrin 1
NCBI Gene IDGeneID:133060
EnsemblENSG00000163982.6
HGNCHGNC:19656
RefSeq ProteinNP_819056.1
Protein Length (ref)612 aa
Haplotypes19
TM Helices (ref)12
Distinct Topologies4
Ref (a0001) TopologyTMhelix(61-82)->TMhelix(92-112)->TMhelix(135-156)->TMhelix(167-186)->TMhelix(201-219)->TMhelix(269-289)->TMhelix(311-332)->TMhelix(347-369)->TMhelix(393-413)->TMhelix(424-444)->TMhelix(546-563)->TMhelix(577-597)
Genomic Regionchr4: 4183726-4231929
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼