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deepTMHMM Topology Viewer — PGAP1 PGAP1_chr2_196828004_196931707

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolPGAP1
Gene Namepost-GPI attachment to proteins inositol deacylase 1
NCBI Gene IDGeneID:80055
EnsemblENSG00000197121.15
HGNCHGNC:25712
RefSeq ProteinNP_079265.2
Protein Length (ref)922 aa
Haplotypes3
TM Helices (ref)10
Distinct Topologies1
Ref (a0001) TopologyTMhelix(8-29)->TMhelix(593-610)->TMhelix(639-650)->TMhelix(679-694)->TMhelix(732-745)->TMhelix(749-758)->TMhelix(818-838)->TMhelix(854-868)->TMhelix(882-899)->TMhelix(908-918)
Genomic Regionchr2: 196828004-196931707
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼