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deepTMHMM Topology Viewer — PTCH1 PTCH1_chr9_95437980_95514266

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolPTCH1
Gene Namepatched 1
NCBI Gene IDGeneID:5727
EnsemblENSG00000185920.19
HGNCHGNC:9585
RefSeq ProteinNP_000255.2
Protein Length (ref)1447 aa
Haplotypes16
TM Helices (ref)12
Distinct Topologies1
Ref (a0001) TopologyTMhelix(101-121)->TMhelix(437-457)->TMhelix(473-493)->TMhelix(502-522)->TMhelix(548-568)->TMhelix(578-598)->TMhelix(749-769)->TMhelix(1028-1048)->TMhelix(1056-1076)->TMhelix(1084-1104)->TMhelix(1122-1141)->TMhelix(1155-1175)
Genomic Regionchr9: 95437980-95514266
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼