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deepTMHMM Topology Viewer — PTCH1 PTCH1_chr9_95437980_95521971

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolPTCH1
Gene Namepatched 1
NCBI Gene IDGeneID:5727
EnsemblENSG00000185920.19
HGNCHGNC:9585
RefSeq ProteinNP_001077072.1
Protein Length (ref)1446 aa
Haplotypes16
TM Helices (ref)12
Distinct Topologies1
Ref (a0001) TopologyTMhelix(100-120)->TMhelix(436-456)->TMhelix(472-492)->TMhelix(501-521)->TMhelix(547-567)->TMhelix(577-597)->TMhelix(748-768)->TMhelix(1027-1047)->TMhelix(1055-1075)->TMhelix(1083-1103)->TMhelix(1121-1140)->TMhelix(1154-1174)
Genomic Regionchr9: 95437980-95521971
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼