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deepTMHMM Topology Viewer — PTCH2 PTCH2_chr1_44816938_44848253

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolPTCH2
Gene Namepatched 2
NCBI Gene IDGeneID:8643
EnsemblENSG00000117425.14
HGNCHGNC:9586
RefSeq ProteinNP_003729.3
Protein Length (ref)1203 aa
Haplotypes10
TM Helices (ref)12
Distinct Topologies2
Ref (a0001) TopologyTMhelix(58-78)->TMhelix(393-413)->TMhelix(429-449)->TMhelix(458-478)->TMhelix(502-522)->TMhelix(531-551)->TMhelix(687-707)->TMhelix(964-984)->TMhelix(992-1012)->TMhelix(1020-1040)->TMhelix(1058-1077)->TMhelix(1091-1111)
Genomic Regionchr1: 44816938-44848253
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼