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deepTMHMM Topology Viewer — PTCHD4 PTCHD4_chr6_47851673_48116197

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolPTCHD4
Gene Namepatched domain containing 4
NCBI Gene IDGeneID:442213
EnsemblENSG00000244694.8
HGNCHGNC:21345
RefSeq ProteinNP_001371182.1
Protein Length (ref)843 aa
Haplotypes4
TM Helices (ref)12
Distinct Topologies2
Ref (a0001) TopologyTMhelix(39-59)->TMhelix(234-247)->TMhelix(260-282)->TMhelix(291-309)->TMhelix(333-353)->TMhelix(368-390)->TMhelix(460-480)->TMhelix(656-676)->TMhelix(680-700)->TMhelix(711-731)->TMhelix(753-773)->TMhelix(781-806)
Genomic Regionchr6: 47851673-48116197
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼