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deepTMHMM Topology Viewer — SCAP SCAP_chr3_47408681_47480941

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSCAP
Gene NameSREBF chaperone
NCBI Gene IDGeneID:22937
EnsemblENSG00000114650.21
HGNCHGNC:30634
RefSeq ProteinNP_036367.2
Protein Length (ref)1279 aa
Haplotypes13
TM Helices (ref)8
Distinct Topologies1
Ref (a0001) TopologyTMhelix(19-39)->TMhelix(280-300)->TMhelix(313-333)->TMhelix(345-365)->TMhelix(402-422)->TMhelix(424-444)->TMhelix(519-539)->TMhelix(710-730)
Genomic Regionchr3: 47408681-47480941
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼