deepTMHMM Topology Viewer

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼

Gene SymbolSCN10A

Gene Namesodium voltage-gated channel alpha subunit 10

NCBI Gene IDGeneID:6336

EnsemblENSG00000185313.9

HGNCHGNC:10582

RefSeq ProteinNP_006505.4

Protein Length (ref)1956 aa

Haplotypes33

TM Helices (ref)22

Distinct Topologies4

Ref (a0001) TopologyTMhelix(131-148)->TMhelix(156-173)->TMhelix(191-200)->TMhelix(202-211)->TMhelix(249-269)->TMhelix(374-392)->TMhelix(666-684)->TMhelix(699-719)->TMhelix(788-805)->TMhelix(868-886)->TMhelix(1153-1172)->TMhelix(1185-1199)->TMhelix(1201-1210)->TMhelix(1223-1237)->TMhelix(1281-1298)->TMhelix(1396-1413)->TMhelix(1477-1495)->TMhelix(1507-1527)->TMhelix(1544-1560)->TMhelix(1569-1578)->TMhelix(1604-1626)->TMhelix(1697-1717)

Genomic Regionchr3: 38691807-38821217

deepTMHMM Topology Viewer — SCN10A SCN10A_chr3_38691807_38821217