deepTMHMM Topology Viewer

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼

Gene SymbolSCN2A

Gene Namesodium voltage-gated channel alpha subunit 2

NCBI Gene IDGeneID:6326

EnsemblENSG00000136531.19

HGNCHGNC:10588

RefSeq ProteinNP_001358175.1

Protein Length (ref)2005 aa

Haplotypes5

TM Helices (ref)24

Distinct Topologies2

Ref (a0001) TopologyTMhelix(130-148)->TMhelix(162-175)->TMhelix(193-208)->TMhelix(210-219)->TMhelix(251-271)->TMhelix(402-420)->TMhelix(760-778)->TMhelix(790-799)->TMhelix(801-811)->TMhelix(825-843)->TMhelix(881-900)->TMhelix(961-978)->TMhelix(1209-1227)->TMhelix(1245-1255)->TMhelix(1257-1266)->TMhelix(1279-1294)->TMhelix(1337-1354)->TMhelix(1449-1469)->TMhelix(1532-1551)->TMhelix(1562-1572)->TMhelix(1574-1583)->TMhelix(1596-1612)->TMhelix(1659-1679)->TMhelix(1751-1771)

Genomic Regionchr2: 165234414-165397304

deepTMHMM Topology Viewer — SCN2A SCN2A_chr2_165234414_165397304