deepTMHMM Topology Viewer

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼

Gene SymbolSCN5A

Gene Namesodium voltage-gated channel alpha subunit 5

NCBI Gene IDGeneID:6331

EnsemblENSG00000183873.18

HGNCHGNC:10593

RefSeq ProteinNP_000326.2

Protein Length (ref)2016 aa

Haplotypes25

TM Helices (ref)24

Distinct Topologies1

Ref (a0001) TopologyTMhelix(132-149)->TMhelix(159-177)->TMhelix(195-204)->TMhelix(206-218)->TMhelix(253-273)->TMhelix(388-408)->TMhelix(723-736)->TMhelix(751-760)->TMhelix(762-771)->TMhelix(783-798)->TMhelix(839-858)->TMhelix(916-934)->TMhelix(1206-1224)->TMhelix(1242-1252)->TMhelix(1254-1263)->TMhelix(1276-1291)->TMhelix(1334-1351)->TMhelix(1448-1465)->TMhelix(1529-1547)->TMhelix(1559-1577)->TMhelix(1592-1601)->TMhelix(1603-1612)->TMhelix(1656-1676)->TMhelix(1746-1771)

Genomic Regionchr3: 38543062-38654687

deepTMHMM Topology Viewer — SCN5A SCN5A_chr3_38543062_38654687