deepTMHMM Topology Viewer

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼

Gene SymbolSCN8A

Gene Namesodium voltage-gated channel alpha subunit 8

NCBI Gene IDGeneID:6334

EnsemblENSG00000196876.19

HGNCHGNC:10596

RefSeq ProteinNP_001317189.1

Protein Length (ref)1980 aa

Haplotypes1

TM Helices (ref)24

Distinct Topologies1

Ref (a0001) TopologyTMhelix(133-151)->TMhelix(165-178)->TMhelix(196-205)->TMhelix(207-219)->TMhelix(254-274)->TMhelix(388-406)->TMhelix(754-772)->TMhelix(784-805)->TMhelix(819-835)->TMhelix(837-846)->TMhelix(875-894)->TMhelix(954-972)->TMhelix(1199-1217)->TMhelix(1235-1245)->TMhelix(1247-1257)->TMhelix(1269-1284)->TMhelix(1327-1344)->TMhelix(1445-1460)->TMhelix(1523-1541)->TMhelix(1553-1567)->TMhelix(1586-1595)->TMhelix(1597-1606)->TMhelix(1650-1670)->TMhelix(1741-1765)

Genomic Regionchr12: 51586233-51817864

deepTMHMM Topology Viewer — SCN8A SCN8A_chr12_51586233_51817864