deepTMHMM Topology Viewer

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼

Gene SymbolSCN9A

Gene Namesodium voltage-gated channel alpha subunit 9

NCBI Gene IDGeneID:6335

EnsemblENSG00000169432.19

HGNCHGNC:10597

RefSeq ProteinNP_001352465.1

Protein Length (ref)1988 aa

Haplotypes30

TM Helices (ref)24

Distinct Topologies6

Ref (a0001) TopologyTMhelix(127-145)->TMhelix(155-172)->TMhelix(190-199)->TMhelix(201-213)->TMhelix(248-268)->TMhelix(377-397)->TMhelix(745-763)->TMhelix(778-798)->TMhelix(810-821)->TMhelix(823-834)->TMhelix(866-885)->TMhelix(945-963)->TMhelix(1193-1204)->TMhelix(1207-1216)->TMhelix(1232-1247)->TMhelix(1263-1278)->TMhelix(1321-1338)->TMhelix(1431-1453)->TMhelix(1516-1534)->TMhelix(1546-1556)->TMhelix(1558-1567)->TMhelix(1580-1595)->TMhelix(1643-1663)->TMhelix(1735-1755)

Genomic Regionchr2: 166190185-166380944

deepTMHMM Topology Viewer — SCN9A SCN9A_chr2_166190185_166380944