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deepTMHMM Topology Viewer — SDC1 SDC1_chr2_20195797_20230130

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSDC1
Gene Namesyndecan 1
NCBI Gene IDGeneID:6382
EnsemblENSG00000115884.11
HGNCHGNC:10658
RefSeq ProteinNP_002988.4
Protein Length (ref)310 aa
Haplotypes11
TM Helices (ref)1
Distinct Topologies2
Ref (a0001) Topologysignal(1-22)->TMhelix(255-275)
Genomic Regionchr2: 20195797-20230130
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼