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deepTMHMM Topology Viewer — SHANK1 SHANK1_chr19_50654255_50724802

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSHANK1
Gene NameSH3 and multiple ankyrin repeat domains 1
NCBI Gene IDGeneID:50944
EnsemblENSG00000161681.17
HGNCHGNC:15474
RefSeq ProteinNP_057232.2
Protein Length (ref)2161 aa
Haplotypes18
TM Helices (ref)0
Distinct Topologies1
Ref (a0001) TopologyNo TM / Signal
Genomic Regionchr19: 50654255-50724802
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼