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deepTMHMM Topology Viewer — SLC11A1 SLC11A1_chr2_218377273_218401894

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC11A1
Gene Namesolute carrier family 11 member 1
NCBI Gene IDGeneID:6556
EnsemblENSG00000018280.17
HGNCHGNC:10907
RefSeq ProteinNP_000569.3
Protein Length (ref)550 aa
Haplotypes13
TM Helices (ref)12
Distinct Topologies3
Ref (a0001) TopologyTMhelix(65-78)->TMhelix(92-107)->TMhelix(136-156)->TMhelix(168-188)->TMhelix(195-216)->TMhelix(241-259)->TMhelix(284-307)->TMhelix(361-381)->TMhelix(401-418)->TMhelix(430-447)->TMhelix(467-487)->TMhelix(495-516)
Genomic Regionchr2: 218377273-218401894
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼