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deepTMHMM Topology Viewer — SLC12A1 SLC12A1_chr15_48201302_48309078

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC12A1
Gene Namesolute carrier family 12 member 1
NCBI Gene IDGeneID:6557
EnsemblENSG00000074803.21
HGNCHGNC:10910
RefSeq ProteinNP_000329.2
Protein Length (ref)1099 aa
Haplotypes10
TM Helices (ref)12
Distinct Topologies2
Ref (a0001) TopologyTMhelix(177-200)->TMhelix(211-237)->TMhelix(260-287)->TMhelix(301-324)->TMhelix(326-347)->TMhelix(380-396)->TMhelix(414-438)->TMhelix(493-513)->TMhelix(545-565)->TMhelix(567-587)->TMhelix(603-623)->TMhelix(625-643)
Genomic Regionchr15: 48201302-48309078
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼