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deepTMHMM Topology Viewer — SLC12A8 SLC12A8_chr3_125077644_125217748

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC12A8
Gene Namesolute carrier family 12 member 8
NCBI Gene IDGeneID:84561
EnsemblENSG00000221955.11
HGNCHGNC:15595
RefSeq ProteinNP_078904.4
Protein Length (ref)714 aa
Haplotypes18
TM Helices (ref)12
Distinct Topologies4
Ref (a0001) TopologyTMhelix(44-62)->TMhelix(73-93)->TMhelix(122-142)->TMhelix(154-174)->TMhelix(178-203)->TMhelix(233-251)->TMhelix(269-289)->TMhelix(309-329)->TMhelix(361-380)->TMhelix(382-402)->TMhelix(596-612)->TMhelix(614-631)
Genomic Regionchr3: 125077644-125217748
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼