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deepTMHMM Topology Viewer — SLC13A1 SLC13A1_chr7_123108531_123204969

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC13A1
Gene Namesolute carrier family 13 member 1
NCBI Gene IDGeneID:6561
EnsemblENSG00000081800.9
HGNCHGNC:10916
RefSeq ProteinNP_071889.2
Protein Length (ref)595 aa
Haplotypes8
TM Helices (ref)15
Distinct Topologies4
Ref (a0001) TopologyTMhelix(13-30)->TMhelix(41-50)->TMhelix(57-69)->TMhelix(87-96)->TMhelix(122-138)->TMhelix(141-150)->TMhelix(246-256)->TMhelix(284-308)->TMhelix(348-363)->TMhelix(388-399)->TMhelix(435-447)->TMhelix(471-485)->TMhelix(487-497)->TMhelix(523-532)->TMhelix(553-573)
Genomic Regionchr7: 123108531-123204969
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼