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deepTMHMM Topology Viewer — SLC13A4 SLC13A4_chr7_135676231_135733186

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC13A4
Gene Namesolute carrier family 13 member 4
NCBI Gene IDGeneID:26266
EnsemblENSG00000164707.16
HGNCHGNC:15827
RefSeq ProteinNP_001305121.1
Protein Length (ref)627 aa
Haplotypes7
TM Helices (ref)15
Distinct Topologies2
Ref (a0001) TopologyTMhelix(13-29)->TMhelix(40-50)->TMhelix(55-69)->TMhelix(86-96)->TMhelix(122-138)->TMhelix(141-150)->TMhelix(269-286)->TMhelix(314-334)->TMhelix(378-392)->TMhelix(417-428)->TMhelix(467-478)->TMhelix(503-517)->TMhelix(519-530)->TMhelix(555-564)->TMhelix(583-604)
Genomic Regionchr7: 135676231-135733186
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼