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deepTMHMM Topology Viewer — SLC15A1 SLC15A1_chr13_98678801_98757672

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC15A1
Gene Namesolute carrier family 15 member 1
NCBI Gene IDGeneID:6564
EnsemblENSG00000088386.17
HGNCHGNC:10920
RefSeq ProteinNP_005064.1
Protein Length (ref)708 aa
Haplotypes22
TM Helices (ref)12
Distinct Topologies2
Ref (a0001) TopologyTMhelix(28-47)->TMhelix(58-78)->TMhelix(84-103)->TMhelix(122-139)->TMhelix(162-183)->TMhelix(199-219)->TMhelix(277-297)->TMhelix(325-345)->TMhelix(362-382)->TMhelix(585-605)->TMhelix(617-637)->TMhelix(649-667)
Genomic Regionchr13: 98678801-98757672
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼