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deepTMHMM Topology Viewer — SLC15A4 SLC15A4_chr12_128788194_128828958

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC15A4
Gene Namesolute carrier family 15 member 4
NCBI Gene IDGeneID:121260
EnsemblENSG00000139370.12
HGNCHGNC:23090
RefSeq ProteinNP_663623.1
Protein Length (ref)577 aa
Haplotypes14
TM Helices (ref)12
Distinct Topologies4
Ref (a0001) TopologyTMhelix(36-62)->TMhelix(77-96)->TMhelix(105-125)->TMhelix(156-176)->TMhelix(194-216)->TMhelix(223-243)->TMhelix(317-338)->TMhelix(367-392)->TMhelix(405-422)->TMhelix(455-475)->TMhelix(487-510)->TMhelix(536-553)
Genomic Regionchr12: 128788194-128828958
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼