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deepTMHMM Topology Viewer — SLC16A1 SLC16A1_chr1_112906847_112961196

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC16A1
Gene Namesolute carrier family 16 member 1
NCBI Gene IDGeneID:6566
EnsemblENSG00000155380.13
HGNCHGNC:10922
RefSeq ProteinNP_003042.3
Protein Length (ref)500 aa
Haplotypes5
TM Helices (ref)12
Distinct Topologies1
Ref (a0001) TopologyTMhelix(16-36)->TMhelix(60-80)->TMhelix(87-107)->TMhelix(112-132)->TMhelix(144-164)->TMhelix(167-187)->TMhelix(263-283)->TMhelix(299-319)->TMhelix(329-349)->TMhelix(354-374)->TMhelix(390-410)->TMhelix(423-443)
Genomic Regionchr1: 112906847-112961196
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼