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deepTMHMM Topology Viewer — SLC16A4 SLC16A4_chr1_110357857_110396026

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC16A4
Gene Namesolute carrier family 16 member 4
NCBI Gene IDGeneID:9122
EnsemblENSG00000168679.18
HGNCHGNC:10925
RefSeq ProteinNP_004687.1
Protein Length (ref)487 aa
Haplotypes5
TM Helices (ref)12
Distinct Topologies2
Ref (a0001) TopologyTMhelix(18-38)->TMhelix(61-81)->TMhelix(88-106)->TMhelix(113-133)->TMhelix(149-169)->TMhelix(176-195)->TMhelix(300-320)->TMhelix(338-358)->TMhelix(367-386)->TMhelix(391-411)->TMhelix(426-446)->TMhelix(457-479)
Genomic Regionchr1: 110357857-110396026
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼