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deepTMHMM Topology Viewer — SLC18A1 SLC18A1_chr8_20139855_20188136

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC18A1
Gene Namesolute carrier family 18 member A1
NCBI Gene IDGeneID:6570
EnsemblENSG00000036565.15
HGNCHGNC:10934
RefSeq ProteinNP_003044.1
Protein Length (ref)525 aa
Haplotypes21
TM Helices (ref)12
Distinct Topologies2
Ref (a0001) TopologyTMhelix(22-42)->TMhelix(141-161)->TMhelix(168-186)->TMhelix(192-212)->TMhelix(232-244)->TMhelix(258-278)->TMhelix(303-323)->TMhelix(336-356)->TMhelix(366-386)->TMhelix(391-411)->TMhelix(429-452)->TMhelix(458-478)
Genomic Regionchr8: 20139855-20188136
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼