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deepTMHMM Topology Viewer — SLC19A1 SLC19A1_chr21_45507565_45547440

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC19A1
Gene Namesolute carrier family 19 member 1
NCBI Gene IDGeneID:6573
EnsemblENSG00000173638.19
HGNCHGNC:10937
RefSeq ProteinNP_919231.1
Protein Length (ref)591 aa
Haplotypes8
TM Helices (ref)12
Distinct Topologies1
Ref (a0001) TopologyTMhelix(28-48)->TMhelix(68-87)->TMhelix(94-113)->TMhelix(121-136)->TMhelix(153-177)->TMhelix(185-203)->TMhelix(269-288)->TMhelix(308-324)->TMhelix(337-356)->TMhelix(363-385)->TMhelix(398-418)->TMhelix(432-452)
Genomic Regionchr21: 45507565-45547440
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼