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deepTMHMM Topology Viewer — SLC19A2 SLC19A2_chr1_169458909_169490944

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC19A2
Gene Namesolute carrier family 19 member 2
NCBI Gene IDGeneID:10560
EnsemblENSG00000117479.15
HGNCHGNC:10938
RefSeq ProteinNP_008927.1
Protein Length (ref)497 aa
Haplotypes5
TM Helices (ref)12
Distinct Topologies2
Ref (a0001) TopologyTMhelix(30-46)->TMhelix(73-92)->TMhelix(98-118)->TMhelix(121-141)->TMhelix(159-180)->TMhelix(188-208)->TMhelix(295-313)->TMhelix(334-354)->TMhelix(361-383)->TMhelix(387-407)->TMhelix(421-443)->TMhelix(456-479)
Genomic Regionchr1: 169458909-169490944
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼