← Back to Summary

deepTMHMM Topology Viewer — SLC19A3 SLC19A3_chr2_227678763_227723028

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC19A3
Gene Namesolute carrier family 19 member 3
NCBI Gene IDGeneID:80704
EnsemblENSG00000135917.16
HGNCHGNC:16266
RefSeq ProteinNP_079519.1
Protein Length (ref)496 aa
Haplotypes7
TM Helices (ref)12
Distinct Topologies4
Ref (a0001) TopologyTMhelix(12-32)->TMhelix(55-74)->TMhelix(81-99)->TMhelix(108-128)->TMhelix(146-165)->TMhelix(171-191)->TMhelix(278-296)->TMhelix(317-334)->TMhelix(346-366)->TMhelix(369-392)->TMhelix(405-426)->TMhelix(439-460)
Genomic Regionchr2: 227678763-227723028
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼