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deepTMHMM Topology Viewer — SLC1A1 SLC1A1_chr9_4485468_4592469

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC1A1
Gene Namesolute carrier family 1 member 1
NCBI Gene IDGeneID:6505
EnsemblENSG00000106688.12
HGNCHGNC:10939
RefSeq ProteinNP_004161.4
Protein Length (ref)524 aa
Haplotypes4
TM Helices (ref)8
Distinct Topologies1
Ref (a0001) TopologyTMhelix(18-38)->TMhelix(58-79)->TMhelix(94-116)->TMhelix(209-229)->TMhelix(239-266)->TMhelix(286-308)->TMhelix(354-380)->TMhelix(441-462)
Genomic Regionchr9: 4485468-4592469
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼