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deepTMHMM Topology Viewer — SLC1A3 SLC1A3_chr5_36601606_36693334

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC1A3
Gene Namesolute carrier family 1 member 3
NCBI Gene IDGeneID:6507
EnsemblENSG00000079215.15
HGNCHGNC:10941
RefSeq ProteinNP_004163.3
Protein Length (ref)542 aa
Haplotypes9
TM Helices (ref)8
Distinct Topologies2
Ref (a0001) TopologyTMhelix(48-68)->TMhelix(87-108)->TMhelix(123-145)->TMhelix(237-260)->TMhelix(270-297)->TMhelix(319-340)->TMhelix(386-412)->TMhelix(473-494)
Genomic Regionchr5: 36601606-36693334
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼