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deepTMHMM Topology Viewer — SLC1A4 SLC1A4_chr2_64984399_65028865

Per-haplotype transmembrane topology predictions from JoGo haplotype-resolved proteome (deepTMHMM)

Gene Information ▼
Gene SymbolSLC1A4
Gene Namesolute carrier family 1 member 4
NCBI Gene IDGeneID:6509
EnsemblENSG00000115902.11
HGNCHGNC:10942
RefSeq ProteinNP_003029.2
Protein Length (ref)532 aa
Haplotypes13
TM Helices (ref)8
Distinct Topologies2
Ref (a0001) TopologyTMhelix(42-62)->TMhelix(81-102)->TMhelix(117-139)->TMhelix(218-237)->TMhelix(257-277)->TMhelix(298-320)->TMhelix(369-390)->TMhelix(453-473)
Genomic Regionchr2: 64984399-65028865
Topology Architecture Diagram ▼
Topology Differences vs Reference (a0001) ▼
Haplotype ▲▼ Diff Type ▲▼ Detail ▲▼
Haplotype Topology Details ▼
Summary Statistics ▼